Differential Expression Analysis with DESeq

Authors

Michael D. Lee, Shengwei Hou

Summary

This RStudio binder contains example code for generating hierarchical clustering and ordination exploratory visualizations and some example code for running a differential expression analysis in DESeq2.

Links

Github Repository: https://github.com/AstrobioMike/speeding-up-science-binder/

Open Notebook (Binder):

Open Notebook (HTML):

• Exploratory visualizations
• DESeq2